Occurrence and control of Pseudomonas cichorii, the bacterial pathogen causing midrib rot on 'Batavia' lettuce under a deep-flow technique hydroponic system
Abd El-Rahman, A., Abd-El-Aziz, R., Ali, A. (2025). Occurrence and control of Pseudomonas cichorii, the bacterial pathogen causing midrib rot on 'Batavia' lettuce under a deep-flow technique hydroponic system. EKB Journal Management System, 53(1), 111-129. doi: 10.21608/ejp.2025.427628
Ashraf Fathy Abd El-Rahman; Rabab Mohamed Abd-El-Aziz; Ayat Mahmoud Ali. "Occurrence and control of Pseudomonas cichorii, the bacterial pathogen causing midrib rot on 'Batavia' lettuce under a deep-flow technique hydroponic system". EKB Journal Management System, 53, 1, 2025, 111-129. doi: 10.21608/ejp.2025.427628
Abd El-Rahman, A., Abd-El-Aziz, R., Ali, A. (2025). 'Occurrence and control of Pseudomonas cichorii, the bacterial pathogen causing midrib rot on 'Batavia' lettuce under a deep-flow technique hydroponic system', EKB Journal Management System, 53(1), pp. 111-129. doi: 10.21608/ejp.2025.427628
Abd El-Rahman, A., Abd-El-Aziz, R., Ali, A. Occurrence and control of Pseudomonas cichorii, the bacterial pathogen causing midrib rot on 'Batavia' lettuce under a deep-flow technique hydroponic system. EKB Journal Management System, 2025; 53(1): 111-129. doi: 10.21608/ejp.2025.427628

Occurrence and control of Pseudomonas cichorii, the bacterial pathogen causing midrib rot on 'Batavia' lettuce under a deep-flow technique hydroponic system

Egyptian Journal of Phytopathology
Volume 53, Issue 1, June 2025, Pages 111-129    PDF (1.43 M)
Document Type: Original Article
DOI: 10.21608/ejp.2025.427628
Authors
Ashraf Fathy Abd El-Rahman* 1; Rabab Mohamed Abd-El-Aziz1; Ayat Mahmoud Ali2
1Bacterial Diseases Research Department, Plant Pathology Research Institute, Agricultural Research Center (ARC), Giza 12619, Egypt
2Central Lab of Organic Agriculture, Agricultural Research Center (ARC), Giza 12619, Egypt
Abstract
Pseudomonas cichorii is a bacterial pathogen affecting lettuce (Lactuca sativa L.) plants, causing midrib rot (varnish spots) disease in many agricultural systems. No recommended chemical control compounds or programs are known to manage this disease. In this study, midrib rot appeared on 'Batavia' lettuce under a deep flow technique (DFT) hydroponic system. Two isolates (Lett7 and Lett8) out of ten isolates recovered from the diseased plants showed symptoms of dark brown rot when injected into the leaf midribs of "Batavia" lettuce. The two isolates showed negative results with levan production, pectolytic activity, and arginine dihydrolase activity. While, positive results with Gram-reaction (KOH 3%), fluorescence on King’s B agar medium, oxidase reaction, and hypersensitive reaction test on the tobacco plants. The 16S rRNA gene sequences of the two isolates (GenBank PP748272, PP748273) showed 99.70 to 99.85% similarity to P. cichorii (NR_117824), P. cichorii strain PC1 (NR_026532), and P. cichorii strain ATCC 10857 (NR_112070). Also, the pathogenicity gene cluster (hrcRST) sequences of the two isolates (GenBank PQ821676, PQ821677) showed 98.11 to 100% similarity to P. cichorii strain SF0057-3A1 (GU324121), P. cichorii strain AF0089-01 (GU324123), and P. cichorii strain SF0063-01 (GU324122). Single Bacillus sp., a mixture of two Bacillus spp., and H2O2 significantly decreased disease incidence while improving the growth parameters of the lettuce plant. A greater effect was observed when a mixture of two Bacillus spp. was used. In conclusion, combining Bacillus subtilis and Bacillus velezensis as bioagents can control midrib rot and improve lettuce growth characteristics under the DFT hydroponic system.
Keywords
Lactuca sativa; Pseudomonas cichorii; 16S rRNA gene; hrcRST genes; biocontrol; Bacillus spp
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